JAGuaR 2.1
:: DESCRIPTION
JAGuaR is an alignment protocol for paired end RNA-seq reads based on an extended reference. It uses BWA to align reads to the genome and reference transcript models (including annotated exon-exon junctions) specifically allowing the possibility for a single read to span multiple exons.
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::DEVELOPER
Canada’s Michael Smith Genome Sciences Centre
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux / Windows/ MacOsX
- Python
:: DOWNLOAD
:: MORE INFORMATION