HybridPSI – enhanced PSI-BLAST based on Hybrid Alignment

HybridPSI

:: DESCRIPTION

HybridPSI is a new version of the tool in which the Smith-Waterman alignment algorithm core is replaced by the hybrid alignment algorithm.

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::DEVELOPER

Ralf Bundschuh’s Statistical Physics Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 HybridPSI

:: MORE INFORMATION

Citation

Bioinformatics. 2011 Jan 1;27(1):31-7. doi: 10.1093/bioinformatics/btq621. Epub 2010 Nov 24.
A performance enhanced PSI-BLAST based on hybrid alignment.
Li Y1, Chia N, Lauria M, Bundschuh R.

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