HRIBO 1.5.1
:: DESCRIPTION
HRIBO is a workflow to enable reproducible and high-throughput analysis of bacterial Ribo-seq data. The workflow performs all required pre-processing steps and quality control. Importantly, HRIBO outputs annotation-independent ORF predictions based on two complementary prokaryotic-focused tools, and integrates them with additional computed features. This facilitates both the rapid discovery of ORFs and their prioritization for functional characterization.
::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- Conda
:: DOWNLOAD
:: MORE INFORMATION
Citation
Gelhausen R, Svensson SL, Froschauer K, Heyl F, Hadjeras L, Sharma CM, Eggenhofer F, Backofen R.
HRIBO: high-throughput analysis of bacterial ribosome profiling data.
Bioinformatics. 2021 Aug 4;37(14):2061-2063. doi: 10.1093/bioinformatics/btaa959. Erratum in: Bioinformatics. 2021 Jul 16;: PMID: 33175953; PMCID: PMC8337001.