hapLOH 14 – Analysis of loss of Heterozygosity in Tumor Genomes

hapLOH 1.4

:: DESCRIPTION

hapLOH profiles and characterizes tumor genomes using data from SNP microarrays. It is designed to be effective in the presence of high levels of germline contamination.

Advertisement

::DEVELOPER

paul scheet lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/MacOsX
  • Perl
  • Python

:: DOWNLOAD

  hapLOH

:: MORE INFORMATION

Citation

Vattathil, Selina, and Paul Scheet.
Haplotype-based profiling of subtle allelic imbalance with SNP arrays.
Genome research 23.1 (2013): 152-158.

Leave a Reply

Your email address will not be published. Required fields are marked *

This site uses Akismet to reduce spam. Learn how your comment data is processed.