HadoopCNV

:: DESCRIPTION

HadoopCNV (internal codename: PennCNV3) is a Java implementation of MapReduce-based copy number variation caller for next-generation whole-genome sequencing data.

::DEVELOPER

Wang Genomics Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Windows with Cygwin/ Linux / MacOSX
• Perl
• Java

:: DOWNLOAD

HadoopCNV

:: MORE INFORMATION

Citation

Yang H, Chen G, Lima L, Fang H, Jimenez L, Li M, Lyon GJ, He M, Wang K:
HadoopCNV: A dynamic programming imputation algorithm to detect copy number variants from sequencing data.
bioRxiv, 2017.