GT-Scan / GT-Scan2 – Identifying unique Genomic Targets

GT-Scan / GT-Scan2

:: DESCRIPTION

GT-Scan is a tool for predicting optimal target sites in a DNA sequence, in relation to the reference genome of a specified organism.

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GT-Scan2 can help you find the most effictive CRISPR/Cas9 targets in a genomic region by ranking targets by the predicted cutting efficiency.

::DEVELOPER

GT-Scan team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/MacOsX/Windows
  • python

:: DOWNLOAD

No

:: MORE INFORMATION

Citation

Bioinformatics. 2014 May 23. pii: btu354. [Epub ahead of print]
GT-Scan: Identifying unique genomic targets.
O’Brien A, Bailey TL.