GPSmatch
:: DESCRIPTION
GPSmatch is an R package for calculating the Jaccard index to compare ChIP-Seq peaks from one experiment to the peaks of other ChIP-Seq experiments stored in a user-supplied customizable database.
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::DEVELOPER
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Windows/ Linux / MacOsX
- R
- BedTools
:: DOWNLOAD
:: MORE INFORMATION
Citation
Dong A, Bao X.
GPSmatch: An R Package for Comparing Genomic-binding Profile Similarity among Transcriptional Regulators using Customizable Databases.
Bioinformatics. 2021 Oct 21:btab728. doi: 10.1093/bioinformatics/btab728. Epub ahead of print. PMID: 34672337.