GPRuler – Metabolic Gene-Protein-Reaction Rules Automatic Reconstruction

GPRuler

:: DESCRIPTION

GPRuler is an open-source tool to automate the reconstruction process of gene-protein-reaction (GPR) rules for any living organism, which describe with a Boolean logic relationships between the gene products (e.g., enzyme isoforms or subunits) associated with the catalysis of a given reaction.

Advertisement

::DEVELOPER

GPRuler team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • ¬†Linux
  • Python

:: DOWNLOAD

GPRuler

:: MORE INFORMATION

Citation:

Di Filippo M, Damiani C, Pescini D.
GPRuler: Metabolic gene-protein-reaction rules automatic reconstruction.
PLoS Comput Biol. 2021 Nov 8;17(11):e1009550. doi: 10.1371/journal.pcbi.1009550. Epub ahead of print. PMID: 34748537.

Leave a Reply

Your email address will not be published.

This site uses Akismet to reduce spam. Learn how your comment data is processed.