GASV / GASVPro 20131001

:: DESCRIPTION

GASV / GASVPro (Geometric Analysis of Structural Variants) is a software for analysis of structural variation from paired-end sequencing and/or array-CGH data. This software has been tested used to find structural variation in both normal and cancer genomes using data from a variety of next-generation sequencing platforms. It can be used to predict structural variants directly from aligned reads in SAM/BAM format.

::DEVELOPER

Raphael Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux/MacOsx/WIndows
• Java
• Perl

:: DOWNLOAD

 GASV

:: MORE INFORMATION

Citation

S. Sindi, E. Helman, A. Bashir, B.J. Raphael. (2009)
A Geometric Approach for Classification and Comparison of Structural Variants.
Bioinformatics. 25: i222-i230.