FunNet 1.00-3

:: DESCRIPTION

“FunNet” is an integrative tool for analyzing gene co-expression networks from microarray expression data. The analytic model implemented in this library involves two abstraction layers: transcriptional and functional (biological roles). A functional profiling technique using Gene Ontology and KEGG annotations is applied to extract a list of relevant biological themes from microarray expression profiling data.

::DEVELOPER

 Corneliu Henegar

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Linux / MacOsX / Windows
• R package 

:: DOWNLOAD

 FunNet

:: MORE INFORMATION

Citation

FunNet: an integrative tool for exploring transcriptional interactions
Prifti E, Zucker JD, Clément K and Henegar C.
Bioinformatics 2008, doi: 10.1093/bioinformatics/btn492.