FastMLST v0.0.15 – Multilocus Sequence Typing of draft Genome Assemblies

FastMLST v0.0.15

:: DESCRIPTION

FastMLST is a high speed standalone script wrote in Python3, which takes assemblies in FASTA format (gzipped is also allowed) and determines its ST according to MLST schemes defined in PubMLST.

Advertisement

::DEVELOPER

Enzo Guerrero-Araya

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

FastMLST

:: MORE INFORMATION

Citation

Guerrero-Araya E, Muñoz M, Rodríguez C, Paredes-Sabja D.
FastMLST: A Multi-core Tool for Multilocus Sequence Typing of Draft Genome Assemblies.
Bioinform Biol Insights. 2021 Nov 27;15:11779322211059238. doi: 10.1177/11779322211059238. PMID: 34866905; PMCID: PMC8637782.

Leave a Reply

Your email address will not be published. Required fields are marked *

This site uses Akismet to reduce spam. Learn how your comment data is processed.