ExomeCopy 1.32.0
:: DESCRIPTION
ExomeCopy implements a hidden Markov model which uses positional covariates, such as background read depth and GC-content, to simultaneously normalize and segment the samples into regions of constant copy count.
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::DEVELOPER
Department Computational Molecular Biology, Max-Planck-Institute for Molecular Genetics
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux/ Windows/ MacOsX
- R package
- BioConductor
:: DOWNLOAD
:: MORE INFORMATION
Citation
Stat Appl Genet Mol Biol. 2011 Nov 8;10(1).
Modeling read counts for CNV detection in exome sequencing data.
Love MI, Myšičková A, Sun R, Kalscheuer V, Vingron M, Haas SA.