EPIBLASTER 1.0
:: DESCRIPTION
The purpose of EPIBLASTER is to compute the differences of correlation coefficients between Controls and Cases as a mean to isolate for significant SNPs Interactions using gpuCor function of the gputools package on a CUDA enabled graphic card
::DEVELOPER
Machine Learning and Computational Biology Research Group
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux
- R package
- gputools R package
- CUDA developer driver and Toolkit
- GENABLE
:: DOWNLOAD
:: MORE INFORMATION
Citation
Eur J Hum Genet. 2011 Apr;19(4):465-71. doi: 10.1038/ejhg.2010.196.
EPIBLASTER-fast exhaustive two-locus epistasis detection strategy using graphical processing units.
Kam-Thong T, Czamara D, Tsuda K, Borgwardt K, Lewis CM, Erhardt-Lehmann A, Hemmer B, Rieckmann P, Daake M, Weber F, Wolf C, Ziegler A, Pütz B, Holsboer F, Sch?lkopf B, Müller-Myhsok B.