EdaFoldAA / EdaFold 0.1 – Protein Structure Prediction

EdaFoldAA / EdaFold 0.1

:: DESCRIPTION

EdaFoldAA is a fragment assembly based de novo protein structure prediction method that uses an Estimation of Distribution Algorithm for high efficiency conformational sampling.

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EdaFold is a C++/MPI software prototype for fragment-based protein structure prediction based on an Estimation of Distribution Algorithm.

::DEVELOPER

Structural Bioinformatics Team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 EdaFoldAA / EdaFold

:: MORE INFORMATION

Citation

PLoS One. 2013 Jul 25;8(7):e68954. doi: 10.1371/journal.pone.0068954. Print 2013.
Efficient sampling in fragment-based protein structure prediction using an estimation of distribution algorithm.
Simoncini D1, Zhang KY.

PLoS One. 2012;7(7):e38799. doi: 10.1371/journal.pone.0038799. Epub 2012 Jul 19.
A probabilistic fragment-based protein structure prediction algorithm.
Simoncini D1, Berenger F, Shrestha R, Zhang KY.