ecceTERA 1.2.4 – Gene Tree Species Tree Reconciliation

ecceTERA 1.2.4

:: DESCRIPTION

Given a (dated) species tree S, a set of gene trees G, and a set of costs for gene events (duplications, transfers and losses), ecceTERA computes the score of a most parsimonious reconciliation (MPR).

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::DEVELOPER

Computational Methods for Paleogenomics and Comparative Genomics

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

ecceTERA

:: MORE INFORMATION

Citation

Jacox E, Chauve C, Szöllősi GJ, Ponty Y, Scornavacca C.
ecceTERA: comprehensive gene tree-species tree reconciliation using parsimony.
Bioinformatics. 2016 Jul 1;32(13):2056-8. doi: 10.1093/bioinformatics/btw105. Epub 2016 Feb 26. PMID: 27153713.

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