DrivAER

:: DESCRIPTION

DrivAER is a method for identification of Driving transcriptional programs based on AutoEncoder derived Relevance scores. DrivAER infers relevance scores for transcriptional programs with respect to specified outcomes of interest in single-cell RNA sequencing data, such as psuedotemporal ordering or disease status.

::DEVELOPER

Bioinformatics and Systems Medicine Laboratory

:: SCREENSHOTS

n/a

:: REQUIREMENTS

• Linux
• Python

:: DOWNLOAD

DrivAER

:: MORE INFORMATION

Citation:

Simon LM, Yan F, Zhao Z.
DrivAER: Identification of driving transcriptional programs in single-cell RNA sequencing data.
Gigascience. 2020 Dec 10;9(12):giaa122. doi: 10.1093/gigascience/giaa122. PMID: 33301553; PMCID: PMC7727875.