deepTools 3.5.1

:: DESCRIPTION

deepTools is a suite of python tools particularly developed for the efficient analysis of high-throughput sequencing data, such as ChIP-seq, RNA-seq or MNase-seq.

::DEVELOPER

he Bioinformatics Facility at the Max Planck Institute for Immunobiology and Epigenetics, Freiburg.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Windows/ Linux / MacOsX
• Python

:: DOWNLOAD

deepTools

:: MORE INFORMATION

Citation:

Ramírez F, Ryan DP, Grüning B, Bhardwaj V, Kilpert F, Richter AS, Heyne S, Dündar F, Manke T.
deepTools2: a next generation web server for deep-sequencing data analysis.
Nucleic Acids Res. 2016 Jul 8;44(W1):W160-5. doi: 10.1093/nar/gkw257. Epub 2016 Apr 13. PMID: 27079975; PMCID: PMC4987876.

Ramírez F, Dündar F, Diehl S, Grüning BA, Manke T.
deepTools: a flexible platform for exploring deep-sequencing data.
Nucleic Acids Res. 2014 Jul;42(Web Server issue):W187-91. doi: 10.1093/nar/gku365. Epub 2014 May 5. PMID: 24799436; PMCID: PMC4086134.