Deeplasmid – Identifying Plasmids in Microbial Isolates and Assembled Metagenomes

Deeplasmid

:: DESCRIPTION

Deeplasmid is a deep learning tool for distinguishing plasmids from bacterial chromosomes based on the DNA sequence and its encoded biological data.

Advertisement

::DEVELOPER

Deeplasmid team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Docker

:: DOWNLOAD

Deeplasmid

:: MORE INFORMATION

Citation

Andreopoulos WB, Geller AM, Lucke M, Balewski J, Clum A, Ivanova NN, Levy A.
Deeplasmid: deep learning accurately separates plasmids from bacterial chromosomes.
Nucleic Acids Res. 2021 Dec 6:gkab1115. doi: 10.1093/nar/gkab1115. Epub ahead of print. PMID: 34871418.

Leave a Reply

Your email address will not be published. Required fields are marked *

This site uses Akismet to reduce spam. Learn how your comment data is processed.