DCJ2HP
:: DESCRIPTION
DCJ2HP is a software of Bayesian sampling of genomic rearrangement scenarios via double cut and join. The Double Cut and Join (DCJ) model, while less relevant, is computationally easier than the Hannenhalli–Pevzner (HP) model. The author use the computational facilities of the DCJ model to draw a sampling of HP scenarios. It is based on a parallel MCMC method that cools down DCJ scenarios to HP scenarios
::DEVELOPER
István Miklós , Eric Tannier
:: SCREENSHOTS
N/A
:: REQUIREMENTS
- Linux/Windows/MacOsx
- Java
:: MORE INFORMATION
Citation
Bioinformatics. 2010 Dec 15;26(24):3012-9. Epub 2010 Oct 29.
Bayesian sampling of genomic rearrangement scenarios via double cut and join.
Miklós I, Tannier E.