CubeX – Calculation of Pairwise Linkage Disequilibrium using Exact Solution

CubeX

:: DESCRIPTION

CubeX calculates haplotype frequencies using the exact solution to the cubic equation rather than an iterative approach.

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::DEVELOPER

Tom Gaunt’s group in the MRC IEU

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux /Mac OsX / Windows
  • Python

:: DOWNLOAD

 CubeX

:: MORE INFORMATION

Citation:

Gaunt TR, Rodríguez S, Day IN.
Cubic exact solutions for the estimation of pairwise haplotype frequencies: implications for linkage disequilibrium analyses and a web tool ‘CubeX’.
BMC Bioinformatics. 2007 Nov 2;8:428.

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