COSMOS is a Python library for workflow management that allows formal description of pipelines and partitioning of jobs. In addition, it includes a user-interface for tracking the progress of jobs, abstraction of the queuing system and fine-grained control over the workflow. Workflows can be created on traditional computing clusters as well as cloud-based services.
the Wall Lab at Stanford University.
- Linux/ Windows/ MacOsX
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COSMOS: Python library for massively parallel workflows.
Gafni E, Luquette LJ, Lancaster AK, Hawkins JB, Jung JY, Souilmi Y, Wall DP, Tonellato PJ.
Bioinformatics. 2014 Jun 30. pii: btu385