CodonO – Analysis of Synonymous Codon Usage Bias

CodonO

:: DESCRIPTION

CodonO is a new informatics method for measuring synonymous codon usage bias within and across genomes. CodonO measures Synonymous Codon Usage Order (SCUO) in a genomic scale by connecting directly GenBank genomic database. CodonO plots SCUO and GC compositions.

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::DEVELOPER

Systems Biology Laboratory, College of Veterinary Medicine,Mississippi State University

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/Windows

:: DOWNLOAD

 CodonO

:: MORE INFORMATION

Citation

Wan, X.-F., J. Zhou, and D. Xu. 2006.
CodonO: a new informatics method measuring synonymous codon usage bias.
International Journal of General Systems, 35: 109-125.

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