Cell BLAST 0.5 – scRNA-Seq Querying Algorithm.

Cell BLAST 0.5

:: DESCRIPTION

Cell BLAST is a cell querying tool for single-cell transcriptomics data. For each query cell, it searches for most similar cells in the reference database. Annotations in reference cells, e.g. cell type, can then be transfered to query cells based on cell-to-cell similarities.

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::DEVELOPER

Gao Lab, Peking University.

:: SCREENSHOTS

N/A

::REQUIREMENTS

  • Web browser

:: DOWNLOAD

 No

:: MORE INFORMATION

Citation

Cao ZJ, Wei L, Lu S, Yang DC, Gao G.
Searching large-scale scRNA-seq databases via unbiased cell embedding with Cell BLAST.
Nat Commun. 2020 Jul 10;11(1):3458. doi: 10.1038/s41467-020-17281-7. PMID: 32651388; PMCID: PMC7351785.

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