CATT 1.9 – CharActerzing TCR Repertoires

CATT 1.9

:: DESCRIPTION

CATT is a tool for detecting CDR3 sequences from any TCR containing raw sequencing data (including TCR-seq, RNA-seq, scRNA-seq and any TCR contained sequencing data).

Advertisement

::DEVELOPER

An-Yuan Guo’s Bioinformatics Laboratory

:: SCREENSHOTS

N/A

::REQUIREMENTS

  • Linux
  • Julia

:: DOWNLOAD

CATT

:: MORE INFORMATION

Citation

Chen SY, Liu CJ, Zhang Q, Guo AY.
An ultra-sensitive T-cell receptor detection method for TCR-Seq and RNA-Seq data.
Bioinformatics. 2020 Aug 1;36(15):4255-4262. doi: 10.1093/bioinformatics/btaa432. PMID: 32399561.

Leave a Reply

Your email address will not be published.

This site uses Akismet to reduce spam. Learn how your comment data is processed.