Category: Bio-chemical / Engineering

IBRENA 1.0 – In silico Biochemical Reaction Network Analysis

IBRENA 1.0

:: DESCRIPTION

IBRENA (Insilico Biochemical REaction Network Analysis) is a software to aid the analysis of complex biological reaction networks. In order to reduce computation time, in some cases, ordinary differential equations (ODEs) are solved using Visual FORTRAN (HP-Compaq V6.6, Palo Alto, CA) with integrated IMSL library (Visual Numerics Inc., Houston, TX). This reduces the computational time required for time-consuming sensitivity analysis.

::DEVELOPER

Sriram Neelamegham 

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

 IBRENA

:: MORE INFORMATION

Citation

Liu, G. and S. Neelamegham,
In silico Biochemical Reaction Network Analysis (IBRENA): a package for simulation and analysis of reaction networks.
Bioinformatics (2008) 24 (8): 1109-1111.

 

EnzFitter 2 – Curve Fitting & Analysis of Enzyme Kinetics Experiments

EnzFitter 2

:: DESCRIPTION

EnzFitter is a generic curve-fitting package which has custom features designed to make it especially suitable for analysis of enzyme kinetics experiments. For example, initial rate and parameter values can be obtained with their confidence limits for single and twin substrate rate data. Built-in models include Michaelis-Menten with or without substrate inhibition, competitive, uncompetitive and mixed inhibition, ternary complex or ordered bi-bi systems and ping-pong with and without inhibition by substrates. You can easily add other models in conventional algebraic syntax.

::DEVELOPER

Biosoft

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

EnzFitter

:: MORE INFORMATION

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BRD 4.0 – Bioreactor Design

BRD 4.0

:: DESCRIPTION

BRD (Bioreactor Design) is a software to design different kinds of bioreactors. Therefore are three different parts available in the application. In the upper left part, the parameters can be found. In the upper right part the designed bioreactor is shown. In de lower part is a spreadsheet section where the results of the calculations are shown.

::DEVELOPER

Pieter van Santen

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

BRD

:: MORE INFORMATION

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