CARROT – ClAssification of Relationships with ROTations

CARROT

:: DESCRIPTION

CARROT is a tool for relationship inference that leverages linkage disequilibrium to differentiate between rotated relationships, such as (first-, second-, etc) uncle-niece.

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::DEVELOPER

Serafim’s Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows/MacOsX
  • Matlab

:: DOWNLOAD

 CARROT

:: MORE INFORMATION

Citation

Bioinformatics. 2011 Jul 1;27(13):i333-41. doi: 10.1093/bioinformatics/btr243.
Reconstruction of genealogical relationships with applications to Phase III of HapMap.
Kyriazopoulou-Panagiotopoulou S, Kashef Haghighi D, Aerni SJ, Sundquist A, Bercovici S, Batzoglou S.