CancerLSP

:: DESCRIPTION

CancerLSP is a web-bench Liver cancer stage prediction Server. It is developed to predict whether liver tissue samples is cancerous or normal and it also predict whether sample belong to Early (Stage-I) and Late stage of LIHC patients using gene expression data (derived from RNA-seq experiments in the form of RNA-Seq FPKM values) and Methylation Data (The methylation profiles acquired with the Illumina Human- Methylation450K DNA Analysis BeadChip assay, which is based on genotyping of bisulfite-converted genomic DNA at individual CpG-sites to provide a quantitative measure of DNA methylation in terms of Beta values). The user can also analyze data regarding expression of a gene in cancer or Normal and Early or late stage of LIHC for any gene among RNA transcripts included in this analysis.

::DEVELOPER

CancerLSP team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

• Web Browser

:: DOWNLOAD

  NO

:: MORE INFORMATION

Citation

Classification of early and late stage liver hepatocellular carcinoma patients from their genomics and epigenomics profiles.
Kaur H, Bhalla S, Raghava GPS.
PLoS One. 2019 Sep 6;14(9):e0221476. doi: 10.1371/journal.pone.0221476.