BOCTOPUS 2.0 – Topology Predictor for Beta-barrel Membrane Proteins

BOCTOPUS 2.0

:: DESCRIPTION

BOCTOPUS allows for requests of up to 1 protein sequence at a time for better predictive performance.

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::DEVELOPER

Elofsson Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/MacOsX/Windows
  • cmake.

:: DOWNLOAD

 BOCTOPUS

:: MORE INFORMATION

Citation

Inclusion of dyad-repeat pattern improves topology prediction of transmembrane β-barrel proteins.
Hayat S, Peters C, Shu N, Tsirigos KD, Elofsson A.
Bioinformatics. 2016 Jan 21. pii: btw025.

Bioinformatics. 2012 Feb 15;28(4):516-22. doi: 10.1093/bioinformatics/btr710. Epub 2012 Jan 13.
BOCTOPUS: improved topology prediction of transmembrane β barrel proteins.
Hayat S1, Elofsson A.

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