Arioc is a set of computer programs that carry out the alignment of short DNA sequences to a comparatively large reference sequence or genome.
- Linux / Windows
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Arioc: high-throughput read alignment with GPU-accelerated exploration of the seed-and-extend search space.
Wilton R, Budavari T, Langmead B, Wheelan SJ, Salzberg SL, Szalay AS.
PeerJ. 2015 Mar 3;3:e808. doi: 10.7717/peerj.808. eCollection 2015.