AlienTrimmer 2.1 – Detecting and Removing Contaminant Sequences in both ends of NGSread sequence

AlienTrimmer 2.1

:: DESCRIPTION

AlienTrimmer is a software that allows detecting and removing contaminant sequences in both ends of NGSread sequences FASTA/FASTQ formated.

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::DEVELOPER

Alexis Criscuolo (alexis.criscuolo@pasteur.fr)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Windows/ MacOsX
  • Java

:: DOWNLOAD

  AlienTrimmer

:: MORE INFORMATION

Citation

Genomics. 2013 Aug 1. pii: S0888-7543(13)00148-1. doi: 10.1016/j.ygeno.2013.07.011.
AlienTrimmer: A tool to quickly and accurately trim off multiple short contaminant sequences from high-throughput sequencing reads.
Criscuolo A, Brisse S.