ADEPT v1.0 – Domain Independent Sequence Alignment strategy for GPU architectures

ADEPT v1.0

:: DESCRIPTION

ADEPT is a GPU accelerated sequence alignment library for short DNA reads and protein sequences.

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::DEVELOPER

Muaaz Gul Awan

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

ADEPT

:: MORE INFORMATION

Citation

Awan MG, Deslippe J, Buluc A, Selvitopi O, Hofmeyr S, Oliker L, Yelick K.
ADEPT: a domain independent sequence alignment strategy for gpu architectures.
BMC Bioinformatics. 2020 Sep 15;21(1):406. doi: 10.1186/s12859-020-03720-1. PMID: 32933482; PMCID: PMC7493400.

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