SABINE 1.2
:: DESCRIPTION
SABINE (Stand-alone binding specificity estimator) is a tool to predict the binding specificity of a transcription factor (TF), given its amino acid sequence, species, structural superclass and DNA-binding domains. For convenience, the superclass and DNA-binding domains of a given TF can be predicted based on sequence homology with TFs in the training of SABINE.
::DEVELOPER
the Center for Bioinformatics Tübingen (Zentrum für Bioinformatik Tübingen, ZBIT).
:: SCREENSHOTS
:: REQUIREMENTS
- Linux
- Java
:: DOWNLOAD
:: MORE INFORMATION
Citation
PLoS One. 2013 Dec 12;8(12):e82238. doi: 10.1371/journal.pone.0082238. eCollection 2013.
TFpredict and SABINE: Sequence-Based Prediction of Structural and Functional Characteristics of Transcription Factors.
Eichner J, Topf F1, Dräger A, Wrzodek C, Wanke D, Zell A.