SlideSort v2 – All Pairs Similarity Search for Short Reads

SlideSort v2

:: DESCRIPTION

SlideSort is fast and exact method that can find all similar pairs from a string pool in terms of edit distance.

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::DEVELOPER

Kana Shimizu

:: SCREENSHOTS

SlideSort

:: REQUIREMENTS

  • Linux/Windows

:: DOWNLOAD

   SlideSort

:: MORE INFORMATION

Citation

Kana Shimizu and Koji Tsuda
SlideSort:All pairs similarity search for short reads“,
Bioinformatics (2011) 27 (4): 464-470